Perl5 Libaries GenUtil.pm Various utilities for internal use Molecule.pm Manage all-atom molecules SICHO.pm Manage SICHO models Sequence.pm Manage protein sequences MONSSTER.pm Interface to MONSSTER program CHARMM.pm Interface to CHARMM program Amber.pm Interface to Amber program Analyze.pm Analyze protein structures Server.pm Generic server for parallel job execution Client.pm Generic client for parallel job execution SimData.pm Manage simulation data for ensembles Ensemble.pm Manage simulation ensembles LatEnsemble.pm Manage lattice simulation ensembles Cluster.pm Cluster protein structures JobServer.pm Server for parallel ensemble jobs JobClient.pm Client for parallel ensemble jobs ReXServer.pm Replica exchange server LatSimReXServer.pm Replica exchange server for lattice simulations ReXClient.pm Replica exchange client